Butternut Squash Mac Cheese Sage

Featured in: Savory Bites

Enjoy the harmonious blend of roasted butternut squash, garlic, and caramelized onions folded into a creamy cheese sauce and baked with tender macaroni. Topped with crisp, sage-infused breadcrumbs and a touch of Parmesan, this warming main is ideal for cozy nights or festive occasions. The golden crust and velvety sauce offer rich flavor and satisfying texture. Prepare in under 75 minutes for an impressive vegetarian centerpiece the whole table will enjoy. Pair with salad and crisp white wine for balance.

Updated on Fri, 17 Oct 2025 10:31:42 GMT
Golden Butternut Squash Mac & Cheese with crispy sage breadcrumbs, fresh from the oven. Save
Golden Butternut Squash Mac & Cheese with crispy sage breadcrumbs, fresh from the oven. | cravebop.com

This creamy butternut squash mac and cheese is my go-to comfort food for chilly nights and holiday gatherings alike, blending sweet roasted squash with a luscious cheddar&gruyère sauce and a crispy sage breadcrumb topping. Each bite brings the cozy flavors of autumn and the familiar warmth of baked macaroni, elevated with a touch of fresh sage.

I first whipped this up for my friendsgiving potluck and it was the only dish that disappeared before dessert even hit the table. It is now the most-requested dish for Sunday suppers at my house.

Ingredients

  • Butternut squash: about two pounds peeled and cubed delivers natural sweetness and creamy texture Roasting it deepens the flavor so pick one that feels dense and heavy for its size
  • Yellow onion: one small diced forms the backbone of the sauce and brings subtle sweetness Go for a firm onion with tight skin
  • Garlic: two cloves minced adds a savory depth Fresh cloves will always taste best
  • Elbow macaroni or similar short pasta: four hundred grams Sturdy shapes hold up best to the sauce Choose high-quality pasta for best bite
  • Whole milk: two cups and heavy cream half a cup combine to create that classic rich and silky sauce Use full-fat dairy for perfect results
  • Sharp cheddar cheese: two cups shredded provides cheesy tang A block grated fresh melts better than pre-shredded
  • Gruyère cheese: one cup grated for nutty depth Swap in fontina for a milder profile Look for a wedge with a golden hue
  • Unsalted butter: divided between sauce and topping contributes to a velvety sauce Choose European style for extra flavor
  • All-purpose flour: three tablespoons thickens your sauce Look for unbleached for best texture
  • Ground nutmeg: half a teaspoon enhances the squash and cheese flavors Freshly grated if possible
  • Salt and freshly ground black pepper: to taste High-quality salt brings out every ingredient
  • Fresh breadcrumbs: one cup for the topping Adds crunch Use day-old bread if you have it
  • Fresh sage leaves: two tablespoons chopped gives herby aroma and earthy notes Buy sprigs that look vibrant
  • Parmesan cheese: two tablespoons grated for savory bite in the topping
  • Olive oil: for roasting squash and crisping up breadcrumbs Choose extra virgin for taste

Instructions

Prepare and Roast the Squash:
Preheat your oven to four hundred degrees Fahrenheit or two hundred degrees Celsius Toss the butternut squash cubes with a tablespoon of olive oil salt and pepper Spread them on a baking sheet and roast for twenty to twenty five minutes until the edges caramelize and the squash is easily pierced with a fork Set aside to cool
Cook the Pasta:
Reduce the oven temperature to three seventy five degrees Fahrenheit or one ninety degrees Celsius In a large pot of salted boiling water cook the macaroni just until al dente Drain completely and set aside The pasta will finish cooking in the oven so do not overboil
Make the Cheese Sauce Base:
In a large saucepan over medium heat melt two tablespoons of butter Add the diced onion and cook for three to four minutes stirring until translucent Add the minced garlic and stir for another minute to release its aroma
Build the Roux:
Add the three tablespoons flour to the onions and cook stirring constantly for two minutes The flour should coat the aromatics and start to smell toasty but not brown This is essential for a lumpfree sauce
Create the Sauce:
Slowly whisk in the milk and heavy cream Pour it in stages whisking as you go to avoid lumps Bring the mixture to a simmer and cook until it thickens into a silky sauce about five minutes Keep stirring frequently to prevent scorching
Blend in the Squash:
Add the roasted squash and nutmeg into the sauce Use an immersion blender or transfer everything carefully to a blender Puree until completely smooth and creamy The color should be vibrant and the texture velvety
Finish the Cheese Sauce:
Return the pureed sauce to low heat Stir in the cheddar and gruyère cheeses Keep stirring until the cheese melts and the sauce is smooth Season generously with salt and freshly ground black pepper Taste and adjust as needed
Combine Pasta and Sauce:
Gently fold the drained pasta into the cheese sauce Mix until every piece of macaroni is coated Pour the mixture into a greased nine by thirteen inch baking dish and smooth the top
Prepare the Sage Breadcrumb Topping:
Heat one tablespoon butter and one tablespoon olive oil together in a skillet over medium heat Add the chopped sage and let it sizzle for about thirty seconds Stir in fresh breadcrumbs Toss constantly for two to three minutes until golden brown and crisp Remove from heat and stir in the grated parmesan cheese
Top and Bake:
Sprinkle the sage breadcrumb mixture evenly over the macaroni base Bake in the center of your oven for twenty minutes or until bubbling around the edges and the topping is golden Let the casserole cool for at least five minutes before servings so the sauce sets slightly
Close-up of creamy Butternut Squash Mac & Cheese, bubbling hot, ready for a comforting bite. Save
Close-up of creamy Butternut Squash Mac & Cheese, bubbling hot, ready for a comforting bite. | cravebop.com

Every time I make this the aroma of sage and bubbling cheese transports me straight back to my childhood kitchen where my parents always paired comfort food with a little creative twist The sage is my secret weapon for making this dish unforgettable and every family gathering feels warmer when we serve this

Storage tips

Store leftovers in an airtight container in the refrigerator for up to three days Make sure to let the casserole cool completely before transferring Reheat covered in a low oven or gently in the microwave with a splash of milk to maintain creaminess For longer storage slice into individual portions and freeze wrapped tightly in foil and placed in a freezer bag Thaw overnight in the refrigerator for best results

Ingredient substitutions

Swap gruyère for fontina or even mozzarella if you prefer a more mild cheesy profile For gluten free use gluten free pasta and breadcrumbs You can also try cooked quinoa for a breadcrumb alternative Butternut squash can be replaced by roasted pumpkin or kabocha for a slightly earthier flavor

Serving suggestions

Pair this dish with a crisp green salad tossed with a lemony vinaigrette for balance A chilled glass of Sauvignon Blanc or sparkling cider is the perfect beverage to cut through the richness For gatherings serve in individual ramekins for a dinner party worthy presentation

Homemade Butternut Squash Mac & Cheese showcased: a vibrant autumn twist on classic comfort food. Save
Homemade Butternut Squash Mac & Cheese showcased: a vibrant autumn twist on classic comfort food. | cravebop.com

The nutty gruyère mingling with velvety squash makes every forkful worth savoring. Serve hot while the cheesy sauce is bubbling and the sage topping is still fragrant.

Recipe Guide

How do I achieve a smooth cheese sauce?

Whisk flour into melted butter to make a roux, then gradually add hot milk and cream, stirring until thickened before adding the cheeses and squash puree.

Can I substitute Gruyère cheese?

Yes, Fontina or additional sharp cheddar works well if Gruyère is unavailable, maintaining a creamy texture and robust flavor.

How can I make this gluten-free?

Use certified gluten-free pasta and breadcrumbs, and check all packaged ingredients for hidden sources of gluten.

What is the best pasta shape to use?

Elbow macaroni or other short shapes like shells or cavatappi hold the sauce well and provide ideal texture throughout.

Can this dish be prepared ahead of time?

Assemble and refrigerate before baking, then bake just before serving for fresh flavor and optimal breadcrumb crispiness.

How do I get crispy breadcrumbs?

Sauté breadcrumbs with sage in butter and olive oil, stirring until golden and fragrant before topping the pasta mixture.

Butternut Squash Mac Cheese Sage

Roasted butternut squash, cheese, and sage breadcrumbs create a comforting baked dish for gatherings.

Prep duration
25 min
Cook duration
45 min
Complete duration
70 min
Created by Lindsey Carter

Style Savory Bites

Skill level Medium

Heritage American

Output 6 Portions

Nutrition labels Meat-free

What you'll need

Vegetables

01 1 medium butternut squash (about 2 pounds), peeled, seeded, and cubed
02 1 small yellow onion, diced
03 2 cloves garlic, minced

Pasta

01 14 ounces elbow macaroni or other short pasta

Dairy

01 2 cups whole milk
02 1/2 cup heavy cream
03 2 cups shredded sharp cheddar cheese
04 1 cup shredded Gruyère cheese
05 3 tablespoons unsalted butter, divided

Pantry

01 3 tablespoons all-purpose flour
02 1/2 teaspoon ground nutmeg
03 Salt and freshly ground black pepper, to taste
04 1 cup fresh breadcrumbs
05 2 tablespoons chopped fresh sage leaves
06 2 tablespoons grated Parmesan cheese
07 2 tablespoons olive oil

Method

Phase 01

Roast Butternut Squash: Preheat oven to 400°F. Toss butternut squash cubes with 1 tablespoon olive oil, salt, and pepper. Arrange on a baking sheet and roast for 20 to 25 minutes until tender and caramelized. Set aside.

Phase 02

Cook Pasta: Reduce oven temperature to 375°F. Boil elbow macaroni in a large pot of salted water until just al dente. Drain and set aside.

Phase 03

Prepare Aromatics: Melt 2 tablespoons butter in a saucepan over medium heat. Sauté onion for 3 to 4 minutes until translucent, then add garlic and cook for 1 minute more.

Phase 04

Make Roux: Add flour to saucepan and stir constantly for 2 minutes until a roux forms. Gradually whisk in milk and heavy cream until smooth. Simmer and cook, stirring, for 5 minutes until thickened.

Phase 05

Blend Squash Sauce: Add roasted butternut squash and nutmeg into the sauce. Using an immersion blender (or a stand blender), puree until smooth.

Phase 06

Finish Cheese Sauce: Stir in cheddar and Gruyère cheeses until melted and the sauce is smooth. Season with salt and pepper.

Phase 07

Combine Pasta and Sauce: Fold cooked pasta into cheese sauce until well combined. Transfer mixture into a greased 9x13-inch baking dish.

Phase 08

Prepare Sage Breadcrumbs: Heat 1 tablespoon butter and 1 tablespoon olive oil in a skillet over medium heat. Add fresh sage and sauté for 30 seconds. Mix in breadcrumbs and cook, stirring, for 2 to 3 minutes until golden and crisp. Remove from heat and incorporate grated Parmesan.

Phase 09

Assemble and Bake: Sprinkle sage breadcrumbs evenly over the pasta mixture. Bake at 375°F for 20 minutes until bubbly and golden brown. Allow to rest for 5 minutes before serving.

Tools needed

  • Baking sheet
  • Large pot
  • Saucepan
  • Immersion blender or blender
  • Skillet
  • 9x13-inch baking dish
  • Whisk

Allergy alerts

Always review ingredients for potential allergens and seek professional medical advice if uncertain.
  • Contains milk (dairy) and wheat (gluten). Some fresh pasta and breadcrumbs may contain eggs; check product labels if concerned.

Nutrition breakdown (per portion)

Values shown are estimates only - consult healthcare providers for specific advice.
  • Energy: 520
  • Fats: 25 g
  • Carbohydrates: 57 g
  • Proteins: 19 g